Life sciences · Preprint
arXiv · October 15, 2026
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Current heterogeneity-aware training systems for large models balance workloads by assigning unequal numbers of layers across pipeline stages, a strategy aimed at equalizing execution time through a unique pipeline configuration. However, this approach fails to address critical memory constraints and suffers from inherently coarse balancing granularity. In this paper, we propose Heterogeneous Pipeline Parallelism (HPP), a novel approach enabling efficient and fine-grained data balance across heterogeneous pipelines. To address HPP's key challenges, prohibitive search overhead for optimal configurations and high communication overhead from asymmetric All-Reduce, we design the ETH training system. ETH employs a hierarchical workload balance framework that jointly optimizes balance across heterogeneous pipelines and within individual pipeline stages. To mitigate asymmetric communication costs, ETH implements block-wise gradient aggregation. Furthermore, it integrates specialized optimizations that dramatically reduce HPP configuration search overhead. Evaluations demonstrate ETH achieves up to 2x training speedup while reducing configuration generation overhead by up to 56x compared to state-of-the-art systems. The code is available at https://github.com/YuMJie/ETH.